Miyakogusa Predicted Gene

Lj4g3v1813520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T6H9_LOTJA 402 79.1 79.1 (tr|I3T6H9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G11020.1 322 63.7 68.9 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:3676968-3678350 FORWARD LENGTH=321
Medicago Medtr4g113520.1 382 73.6 76.0 | zinc finger protein | HC | chr4:46675210-46679677 | 20130731
Soybean Glyma05g08220.2 377 74.1 77.3  
LJGI gnl|LJGI|TC79183 1505 100.0 100.0 similar to UniRef100_Q6YW60 Cluster: Zinc finger (C3HC4-type RING finger) protein-like; n=1; Oryza sativa Japonica Group|Rep: Zinc finger (C3HC4-type RING finger) protein-like - Oryza sativa subsp. japonica (Rice), partial (82%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1813520.1 length: 253 aa.
IPR011016 Zinc finger, RING-CH-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF12906 RINGv 3.7e-12 52-102
HMMSmart SM00744 The 2.7e-18 51-103
ProfileScan PS51292 ZF_RING_CH 22.018 44-109
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.3e-16 49-108
no_ID  
HMMPanther PTHR23012 MEMBRANE 9.4e-170 1-253
HMMPanther PTHR23012:SF28 ZINC 9.4e-170 1-253
Seg seg seg NA 16-35
182-197
233-249
superfamily SSF57850 RING/U-box 5.7e-14 44-109
Wolf-PSORT
Lj4g3v1813520.1	plas 6, E.R. 4, vacu 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1813520.1