Miyakogusa Predicted Gene

Lj4g3v1812480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S6W2_LOTJA 242 93.2 93.2 (tr|I3S6W2) Histone H2A OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G52740.1 217 82.8 88.8 | Symbols: HTA9 | histone H2A protein 9 | chr1:19645409-19646221 FORWARD LENGTH=134
Medicago Medtr1g011850.1 225 88.1 88.1 | core histone H2A/H2B/H3/H4 | HC | chr1:2226797-2223509 | 20130731
Soybean Glyma14g15260.1 228 88.7 90.2  
LJGI gnl|LJGI|TC81273 755 100.0 100.0 homologue to UniRef100_A7P5K0 Cluster: Histone H2A; n=1; Vitis vinifera|Rep: Histone H2A - Vitis vinifera (Grape), partial (90%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1812480.1 length: 133 aa.
IPR002119 Histone H2A
method AccNumber shortName E-value location
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006334 nucleosome assembly    
FPrintScan PR00620 HISTONEH2A 3.2e-43 24-46
54-69
69-82
83-97
110-128
HMMSmart SM00414 Histone 8.3e-73 13-133
PatternScan PS00046 HISTONE_H2A NA 32-38
IPR007125 Histone core
Molecular Function GO:0003677 DNA binding    
HMMPfam PF00125 Histone 4.3e-22 28-102
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 6.5e-52 16-132
superfamily SSF47113 Histone-fold 1.6e-40 11-110
no_ID  
HMMPanther PTHR23430 HISTONE 6.4e-79 16-129
Seg seg seg NA 16-24
Wolf-PSORT
Lj4g3v1812480.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1812480.1