Miyakogusa Predicted Gene

Lj4g3v1787130.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MUF8_SOYBN 624 71.5 76.4 (tr|I1MUF8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G18520.2 514 61.2 70.7 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 | chr3:6361605-6365399 FORWARD LENGTH=564
Medicago Medtr4g111985.1 606 68.9 75.1 | histone deacetylase superfamily protein | HC | chr4:46339481-46328880 | 20130731
Soybean Glyma17g13000.1 613 70.9 76.0  
LJGI gnl|LJGI|TC69063 1653 100.0 100.0 similar to UniRef100_A7PGP4 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1787130.3 length: 497 aa.
IPR000286 Histone deacetylase superfamily
method AccNumber shortName E-value location
FPrintScan PR01270 HDASUPER 5.4e-14 285-308
318-333
406-416
HMMPanther PTHR10625 HISTONE 3e-194 52-497
IPR023801 Histone deacetylase domain
Gene3D G3DSA:3.40.800.20 no description 3.4e-113 155-483
HMMPfam PF00850 Hist_deacetyl 7.9e-91 174-472
no_ID  
HMMPanther PTHR10625:SF22 HISTONE 3e-194 52-497
Seg seg seg NA 32-44
63-81
83-95
189-200
254-268
superfamily SSF52768 Arginase/deacetylase 1e-103 160-480
Wolf-PSORT
Lj4g3v1787130.3	chlo 5.5, chlo_mito 5.5, mito 4.5, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1787130.3