Miyakogusa Predicted Gene

Lj4g3v1748330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JT41_MEDTR 843 88.1 92.7 (tr|G7JT41) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g112680 PE=4 SV=1
TAIR_pep AT1G72550.2 666 71.5 81.7 | Symbols: | tRNA synthetase beta subunit family protein | chr1:27319999-27323908 REVERSE LENGTH=584
Medicago Medtr4g112680.2 843 88.1 92.7 | phenylalanyl-tRNA synthetase beta chain | HC | chr4:45941704-45949859 | 20130731
Soybean Glyma05g07640.2 840 88.1 92.2  
LJGI gnl|LJGI|TC57511 1469 100.0 100.0 similar to UniRef100_A7PGI6 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1748330.1 length: 485 aa.
IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004826 phenylalanine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006432 phenylalanyl-tRNA aminoacylation    
HMMTigr TIGR00471 pheT_arch: 2.1e-113 1-462
IPR005146 B3/B4 tRNA-binding domain
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004826 phenylalanine-tRNA ligase activity    
HMMPfam PF03483 B3_4 1e-25 123-281
HMMSmart SM00873 B3/4 9.5e-24 119-281
IPR005147 tRNA synthetase, B5-domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006432 phenylalanyl-tRNA aminoacylation    
Gene3D G3DSA:3.30.56.20 no description 6.7e-18 309-382
HMMPfam PF03484 B5 7.8e-17 307-379
HMMSmart SM00874 tRNA 6.7e-21 306-379
ProfileScan PS51483 B5 23.193 304-384
IPR009061 DNA binding domain, putative
Molecular Function GO:0000166 nucleotide binding    
superfamily SSF46955 Putative 1.1e-12 305-384
4-95
no_ID  
Gene3D G3DSA:3.30.930.10 no description 1.6e-06 404-465
HMMPanther PTHR10947 PHENYLALANYL-TRNA 9.6e-178 1-460
Seg seg seg NA 48-61
466-482
superfamily SSF55681 Class 9.1e-09 375-459
Wolf-PSORT
Lj4g3v1748330.1	chlo 9, nucl 1, cyto 1, mito 1, plas 1, extr 1, cyto_nucl 1, nucl_plas 1, mito_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1748330.1