Miyakogusa Predicted Gene

Lj4g3v1736080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KNE2_SOYBN 410 82.0 91.4 (tr|K7KNE2) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G15800.1 266 56.6 72.9 | Symbols: SEP1, AGL2 | K-box region and MADS-box transcription factor family protein | chr5:5151594-5153767 REVERSE LENGTH=251
Medicago Medtr4g109810.1 360 75.2 83.3 | MADS-box transcription factor | HC | chr4:45671372-45677774 | 20130731
Soybean Glyma13g06730.2 294 61.6 74.4  
LJGI gnl|LJGI|TC75219 167 84.4 84.4 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1; Pisum sativum|Rep: MADS box protein M6 - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1736080.1 length: 243 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 8.7e-33 3-23
23-38
38-59
HMMPfam PF00319 SRF-TF 1.5e-29 9-59
HMMSmart SM00432 no description 5.8e-42 1-60
PatternScan PS00350 MADS_BOX_1 NA 3-57
ProfileScan PS50066 MADS_BOX_2 33.922 1-61
superfamily SSF55455 SRF-like 7.8e-34 2-95
IPR002487 Transcription factor, K-box
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 5.9e-25 81-172
ProfileScan PS51297 K_BOX 14.148 86-176
no_ID  
Coil coil coiled-coil NA 93-114
116-144
HMMPanther PTHR11945 MADS 3.9e-97 1-224
HMMPanther PTHR11945:SF19 MADS 3.9e-97 1-224
Wolf-PSORT
Lj4g3v1736080.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1736080.1