Miyakogusa Predicted Gene

Lj4g3v1722980.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SLG6_LOTJA 1030 93.9 94.1 (tr|I3SLG6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G39040.1 786 74.3 84.9 | Symbols: ALS1, ATTAP2, TAP2 | transporter associated with antigen processing protein 2 | chr5:15625660-15629621 FORWARD LENGTH=644
Medicago Medtr4g109720.1 924 84.0 88.7 | ABC transporter B family protein | HC | chr4:45627309-45622091 | 20130731
Soybean Glyma05g00240.1 948 85.6 90.2  
LJGI gnl|LJGI|TC71177 1009 99.8 99.8 similar to UniRef100_A7QHZ1 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1722980.2 length: 543 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 7.1e-52 16-244
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 3.7e-23 336-462
ProfileScan PS50893 ABC_TRANSPORTER_2 26.584 294-531
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.4e-17 321-514
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 7.1e-67 8-273
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 434-448
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 53.741 21-260
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.8e-70 294-517
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 2.4e-79 10-273
Gene3D G3DSA:3.40.50.300 no description 9.4e-84 294-526
HMMPanther PTHR24221 FAMILY 0 5-533
HMMPanther PTHR24221:SF48 SUBFAMILY 0 5-533
Seg seg seg NA 148-160
238-255
Wolf-PSORT
Lj4g3v1722980.2	plas 8, vacu 3, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1722980.2