Miyakogusa Predicted Gene

Lj4g3v1722980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SLG6_LOTJA 917 91.0 91.0 (tr|I3SLG6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G39040.1 632 67.4 78.7 | Symbols: ALS1, ATTAP2, TAP2 | transporter associated with antigen processing protein 2 | chr5:15625660-15629621 FORWARD LENGTH=644
Medicago Medtr4g109720.1 799 79.1 83.9 | ABC transporter B family protein | HC | chr4:45627309-45622091 | 20130731
Soybean Glyma05g00240.1 819 81.9 86.1  
LJGI gnl|LJGI|TC71177 1558 99.9 99.9 similar to UniRef100_A7QHZ1 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1722980.1 length: 508 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 2.5e-53 64-337
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 8.8e-06 429-489
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 2.8e-74 50-366
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 56.696 63-353
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.2e-29 331-484
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 1.3e-88 50-366
Gene3D G3DSA:3.40.50.300 no description 9.1e-34 387-500
HMMPanther PTHR24221 FAMILY 0 5-502
HMMPanther PTHR24221:SF48 SUBFAMILY 0 5-502
Seg seg seg NA 62-74
241-253
331-348
Wolf-PSORT
Lj4g3v1722980.1	plas 6.5, cyto_plas 4, golg 3, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1722980.1