Miyakogusa Predicted Gene

Lj4g3v1721970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JZG9_SOYBN 340 59.8 67.7 (tr|I1JZG9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G18600.1 263 64.9 82.2 | Symbols: ATRBL12, RBL12 | RHOMBOID-like protein 12 | chr1:6400647-6402587 FORWARD LENGTH=336
Medicago Medtr4g109700.1 341 56.4 68.5 | S54 family peptidase | HC | chr4:45616780-45611349 | 20130731
Soybean Glyma05g00250.1 340 59.8 67.7  
LJGI gnl|LJGI|TC68131 1810 99.3 99.3 similar to UniRef100_A7QHZ3 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1721970.1 length: 330 aa.
IPR022764 Peptidase S54, rhomboid domain
method AccNumber shortName E-value location
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 2.4e-29 134-326
HMMPfam PF01694 Rhomboid 2.4e-24 169-327
no_ID  
Seg seg seg NA 14-20
105-125
superfamily SSF144091 Rhomboid-like 5.4e-32 127-330
Wolf-PSORT
Lj4g3v1721970.1	chlo 8, mito 3, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1721970.1 Not targeted -24.278 -20.455 -1.609 19.48% -2.215