Miyakogusa Predicted Gene

Lj4g3v1720850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MT77_SOYBN 523 79.7 87.9 (tr|I1MT77) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G60980.1 287 51.9 68.3 | Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:24543988-24546027 FORWARD LENGTH=459
Medicago Medtr4g109640.2 504 77.3 87.6 | ras GTPase-activating binding-like protein | HC | chr4:45574880-45570261 | 20130731
Soybean Glyma17g08710.3 523 79.7 87.9  
LJGI gnl|LJGI|TC58446 954 100.0 100.0 similar to UniRef100_UPI00001628EF Cluster: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein; n=1; Arabidopsis thaliana|Rep: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein - Arabidopsis thaliana, partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1720850.1 length: 401 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 3.4e-13 249-320
ProfileScan PS50102 RRM 12.919 248-324
IPR002075 Nuclear transport factor 2
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006810 transport    
HMMPfam PF02136 NTF2 2.3e-18 3-79
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 5.8e-15 233-341
IPR018222 Nuclear transport factor 2, Eukaryote
ProfileScan PS50177 NTF2_DOMAIN 21.869 1-79
no_ID  
Gene3D G3DSA:3.10.450.50 no description 3.7e-24 2-83
HMMPanther PTHR10693 RAS 2.2e-96 1-399
HMMPanther PTHR10693:SF8 NUCLEAR 2.2e-96 1-399
HMMPfam PF14259 RRM_6 8.7e-13 250-315
Seg seg seg NA 329-368
375-384
385-397
superfamily SSF54427 NTF2-like 6.8e-22 1-84
superfamily SSF54928 RNA-binding 4.4e-20 246-356
Wolf-PSORT
Lj4g3v1720850.1	cyto 5, chlo 4, mito 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1720850.1