Miyakogusa Predicted Gene
- Lj4g3v1720830.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KME4_SOYBN |
172 |
44.8 |
55.6 |
(tr|K7KME4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G29575.4 |
101 |
61.3 |
76.0 |
| Symbols: AFP3 | ABI five binding protein 3 | chr3:11382416-11383657 REVERSE LENGTH=231 |
| Medicago |
Medtr3g025970.1 |
139 |
43.2 |
54.5 |
| ninja-family protein AFP1 | HC | chr3:7931894-7928987 | 20130731 |
| Soybean |
Glyma04g32390.1 |
147 |
57.1 |
69.2 |
|
| LJGI |
gnl|LJGI|TC69852 |
155 |
84.1 |
84.1 |
weakly similar to UniRef100_A7PAA1 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1720830.1 |
length: 193 aa. |
| IPR012463 |
Protein of unknown function DUF1675 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07897 |
DUF1675 |
1.4e-34 |
78-184 |
| no_ID |
|
| HMMPanther |
PTHR31413 |
FAMILY |
7.2e-27 |
89-193 |
| HMMPanther |
PTHR31413:SF0 |
SUBFAMILY |
7.2e-27 |
89-193 |
- Wolf-PSORT
Lj4g3v1720830.1 nucl 9, cyto 2, extr 1, pero 1, cysk 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1720830.1 |
|