Miyakogusa Predicted Gene

Lj4g3v1719690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JZJ1_SOYBN 1102 81.8 89.0 (tr|I1JZJ1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G61060.1 797 60.2 75.7 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase 5 | chr5:24567137-24570917 REVERSE LENGTH=660
Medicago Medtr4g109500.1 1021 75.5 84.6 | histone deacetylase superfamily protein | HC | chr4:45499722-45507261 | 20130731
Soybean Glyma05g00460.1 1102 81.8 89.0  
LJGI gnl|LJGI|TC61249 1794 99.6 99.6 similar to UniRef100_A7PDA9 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1719690.1 length: 645 aa.
IPR000286 Histone deacetylase superfamily
method AccNumber shortName E-value location
FPrintScan PR01270 HDASUPER 5.1e-09 135-158
262-272
HMMPanther PTHR10625 HISTONE 3e-175 2-418
IPR023801 Histone deacetylase domain
Gene3D G3DSA:3.40.800.20 no description 6.2e-119 7-364
HMMPfam PF00850 Hist_deacetyl 2.9e-94 23-328
no_ID  
HMMPanther PTHR10625:SF22 HISTONE 3e-175 2-418
Seg seg seg NA 381-394
633-642
superfamily SSF52768 Arginase/deacetylase 4.8e-110 6-365
Wolf-PSORT
Lj4g3v1719690.1	cyto 8, nucl 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1719690.1 Not targeted -26.143 -14.587 -4.988 22.81% -6.568