Miyakogusa Predicted Gene

Lj4g3v1687570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q39889_SOYBN 1618 89.2 93.6 (tr|Q39889) Heat shock protein OS=Glycine max GN=SB100 PE=2 SV=1
TAIR_pep AT1G74310.1 1544 84.1 91.9 | Symbols: ATHSP101, HSP101, HOT1 | heat shock protein 101 | chr1:27936715-27939862 REVERSE LENGTH=911
Medicago Medtr4g109450.1 1645 90.0 93.6 | ATP-dependent chaperone ClpB | HC | chr4:45465442-45469308 | 20130731
Soybean Glyma05g00540.1 1625 89.6 93.7  
LJGI gnl|LJGI|TC71141 2694 99.9 99.9 homologue to UniRef100_Q39889 Cluster: Heat shock protein; n=1; Glycine max|Rep: Heat shock protein - Glycine max (Soybean), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1687570.1 length: 909 aa.
IPR001270 Chaperonin ClpA/B
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
FPrintScan PR00300 CLPPROTEASEA 4e-41 602-620
647-665
676-694
709-723
PatternScan PS00871 CLPAB_2 NA 632-650
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 3e-11 199-344
598-769
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 7.4e-14 204-317
IPR004176 Clp, N-terminal
Biological Process GO:0019538 protein metabolic process    
HMMPfam PF02861 Clp_N 9.1e-08 17-55
96-146
IPR013093 ATPase, AAA-2
Molecular Function GO:0005524 ATP binding    
HMMPfam PF07724 AAA_2 4.6e-55 598-762
IPR018368 Chaperonin ClpA/B, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00870 CLPAB_1 NA 295-307
IPR019489 Clp ATPase, C-terminal
HMMPfam PF10431 ClpB_D2-small 1.3e-22 768-848
HMMSmart SM01086 C-terminal, 4.3e-29 768-859
IPR023150 Double Clp-N motif
Gene3D G3DSA:1.10.1780.10 no description 1.5e-35 1-147
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.4e-90 160-546
547-861
no_ID  
Coil coil coiled-coil NA 253-274
406-441
473-494
Gene3D G3DSA:1.10.8.60 no description 1.8e-25 345-429
779-862
Gene3D G3DSA:3.40.50.300 no description 1.9e-56 167-343
556-778
HMMPanther PTHR11638 ATP-DEPENDENT 0 1-886
HMMPanther PTHR11638:SF18 CHAPERONE 0 1-886
Seg seg seg NA 441-456
489-504
superfamily SSF81923 Double 4.9e-30 4-159
Wolf-PSORT
Lj4g3v1687570.1	cyto 11, chlo 1, nucl 1, cysk 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1687570.1