Miyakogusa Predicted Gene

Lj4g3v1687540.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7KMF7_SOYBN 2250 69.1 77.5 (tr|K7KMF7) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G07940.2 249 41.9 56.4 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G07980.1). | chr5:2534720-2540086 FORWARD LENGTH=1526

Medicago Medtr4g109420.1 2264 71.0 78.7 | dentin sialophosphoprotein-like protein, putative | HC | chr4:45454052-45443894 | 20130731

Soybean Glyma05g00550.1 1698 58.2 65.1

LJGI gnl|LJGI|TC80930 1429 100.0 100.0 similar to UniRef100_A7PDC5 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (3%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v1687540.2 length: 1608 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 101-122

HMMPanther PTHR31267 FAMILY 1.4e-149 1-1608

Seg seg seg NA 94-125
342-353
723-734
1435-1446

Wolf-PSORT

Lj4g3v1687540.2 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v1687540.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7KMF7_SOYBN	2250	69.1	77.5	(tr\|K7KMF7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G07940.2	249	41.9	56.4	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G07980.1). \| chr5:2534720-2540086 FORWARD LENGTH=1526
Medicago	Medtr4g109420.1	2264	71.0	78.7	\| dentin sialophosphoprotein-like protein, putative \| HC \| chr4:45454052-45443894 \| 20130731
Soybean	Glyma05g00550.1	1698	58.2	65.1
LJGI	gnl\|LJGI\|TC80930	1429	100.0	100.0	similar to UniRef100_A7PDC5 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (3%)

no_ID
Lj4g3v1687540.2				length: 1608 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	101-122
HMMPanther	PTHR31267	FAMILY	1.4e-149	1-1608
Seg	seg	seg	NA	94-125 342-353 723-734 1435-1446