Miyakogusa Predicted Gene

Lj4g3v1683300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SMA3_LOTJA 511 88.4 88.8 (tr|I3SMA3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G61210.1 292 55.7 68.4 | Symbols: SNAP33, ATSNAP33, SNP33, ATSNAP33B | soluble N-ethylmaleimide-sensitive factor adaptor protein 33 | chr5:24624027-24625366 FORWARD LENGTH=300
Medicago Medtr4g109310.1 387 71.8 78.5 | soluble N-ethylmaleimide-sensitive factor adaptor protein | HC | chr4:45393006-45391267 | 20130731
Soybean Glyma05g00640.1 413 73.2 81.0  
LJGI gnl|LJGI|TC62699 1820 100.0 100.0 similar to UniRef100_A7PDF9 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (85%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1683300.1 length: 305 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF05739 SNARE 3.2e-13 245-302
HMMSmart SM00397 Helical 1.8e-05 106-173
235-302
ProfileScan PS50192 T_SNARE 14.014 245-302
no_ID  
Coil coil coiled-coil NA 271-292
Gene3D G3DSA:1.20.5.110 no description 9.4e-18 98-174
239-305
HMMPanther PTHR19305 SYNAPTOSOMAL 1.8e-56 23-305
HMMPanther PTHR19305:SF0 SUBFAMILY 1.8e-56 23-305
Seg seg seg NA 3-20
163-178
247-262
Wolf-PSORT
Lj4g3v1683300.1	nucl 11, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1683300.1