Miyakogusa Predicted Gene

Lj4g3v1683090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SPM6_LOTJA 330 100.0 100.0 (tr|I3SPM6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G13950.1 293 89.9 93.1 | Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A | eukaryotic elongation factor 5A-1 | chr1:4773631-4774668 FORWARD LENGTH=158
Medicago Medtr3g437680.1 314 95.0 96.2 | eukaryotic translation initiation factor 5A4 | HC | chr3:12821900-12831383 | 20130731
Soybean Glyma01g06600.1 306 93.1 96.9  
LJGI gnl|LJGI|TC67187 957 100.0 100.0 homologue to UniRef100_A6YGE9 Cluster: Translation initiation factor; n=1; Carica papaya|Rep: Translation initiation factor - Carica papaya (Papaya), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1683090.1 length: 160 aa.
IPR001884 Translation elongation factor IF5A
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0008612 peptidyl-lysine modification to hypusine    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
HMMPIR PIRSF003025 Translation 5.4e-98 1-158
HMMPanther PTHR11673 TRANSLATION 3.2e-100 2-160
HMMTigr TIGR00037 eIF_5A: 9.2e-40 17-153
IPR008991 Translation protein SH3-like domain
superfamily SSF50104 Translation 1.7e-26 14-93
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.5e-32 86-158
superfamily SSF50249 Nucleic 1.8e-27 86-157
IPR014722 Ribosomal protein L2 domain 2
Gene3D G3DSA:2.30.30.30 no description 1.9e-41 15-84
IPR019769 Translation elongation factor, IF5A, hypusine site
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0006452 translational frameshifting    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
PatternScan PS00302 IF5A_HYPUSINE NA 50-57
IPR020189 Translation elongation factor, IF5A C-terminal
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003746 translation elongation factor activity    
Biological Process GO:0006452 translational frameshifting    
Molecular Function GO:0043022 ribosome binding    
Biological Process GO:0045901 positive regulation of translational elongation    
Biological Process GO:0045905 positive regulation of translational termination    
HMMPfam PF01287 eIF-5a 1.8e-29 85-154
Wolf-PSORT
Lj4g3v1683090.1	cyto 6, nucl 2, pero 2, chlo 1, extr 1, cysk 1, golg 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1683090.1