Miyakogusa Predicted Gene

Lj4g3v1659940.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JZM3_SOYBN 177 47.1 52.5 (tr|I1JZM3) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT5G61340.1 56.2 28.4 36.0 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:24662064-24663044 REVERSE LENGTH=326

Medicago Medtr4g109020.1 160 44.6 49.1 | transmembrane protein, putative | HC | chr4:45200284-45202032 | 20130731

Soybean Glyma05g00830.1 177 47.1 52.5

LJGI gnl|LJGI|TC68486 71.9 80.9 80.9 weakly similar to UniRef100_A7PDI1 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v1659940.1 length: 222 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 21-53
85-111
145-161
167-180

Wolf-PSORT

Lj4g3v1659940.1 plas 6, chlo 4, E.R._plas 4

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v1659940.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JZM3_SOYBN	177	47.1	52.5	(tr\|I1JZM3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT5G61340.1	56.2	28.4	36.0	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:24662064-24663044 REVERSE LENGTH=326
Medicago	Medtr4g109020.1	160	44.6	49.1	\| transmembrane protein, putative \| HC \| chr4:45200284-45202032 \| 20130731
Soybean	Glyma05g00830.1	177	47.1	52.5
LJGI	gnl\|LJGI\|TC68486	71.9	80.9	80.9	weakly similar to UniRef100_A7PDI1 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)

no_ID
Lj4g3v1659940.1				length: 222 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	21-53 85-111 145-161 167-180