Miyakogusa Predicted Gene
- Lj4g3v1635550.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MTU3_SOYBN |
621 |
83.2 |
92.3 |
(tr|I1MTU3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G74460.1 |
528 |
72.3 |
82.9 |
| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:27988150-27989765 REVERSE LENGTH=366 |
| Medicago |
Medtr4g108690.1 |
602 |
83.8 |
92.3 |
| GDSL-like lipase/acylhydrolase | HC | chr4:45012744-45015362 | 20130731 |
| Soybean |
Glyma17g10900.1 |
621 |
83.2 |
92.3 |
|
| LJGI |
gnl|LJGI|TC60403 |
1933 |
99.7 |
99.7 |
similar to UniRef100_A7PDL4 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (83%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1635550.1 |
length: 367 aa. |
| IPR001087 |
Lipase, GDSL |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006629 |
lipid metabolic process |
|
|
| Molecular Function |
GO:0016788 |
hydrolase activity, acting on ester bonds |
|
|
| HMMPfam |
PF00657 |
Lipase_GDSL |
4.2e-29 |
29-340 |
| IPR013831 |
SGNH hydrolase-type esterase domain |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| Gene3D |
G3DSA:3.40.50.1110 |
no description |
3.6e-86 |
29-343 |
| no_ID |
|
| HMMPanther |
PTHR22835 |
ZINC |
1.9e-107 |
29-340 |
| Seg |
seg |
seg |
NA |
354-365 |
- Wolf-PSORT
Lj4g3v1635550.1 extr 6, cyto 2, chlo 1, mito 1, plas 1, vacu 1, E.R. 1, golg 1, cyto_nucl 1, chlo_mito 1, golg_plas 1, E.R._vacu 1, cyto_pero 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1635550.1 |
|