Miyakogusa Predicted Gene

Lj4g3v1632020.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MKW4_SOYBN 1109 83.4 88.3 (tr|K7MKW4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G74630.1 866 65.5 78.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:28030521-28032452 FORWARD LENGTH=643
Medicago Medtr0493s0010.1 962 74.0 80.4 | pentatricopeptide (PPR) repeat protein | HC | scaffold0493:2001-4149 | 20130731
Soybean Glyma05g08420.1 504 40.1 56.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1632020.2 length: 662 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.51 164-188
224-249
428-452
HMMPfam PF13041 PPR_2 6.5e-11 251-299
354-401
HMMPfam PF13812 PPR_3 0.034 191-219
327-349
HMMTigr TIGR00756 PPR: 0.0018 164-187
224-248
254-288
356-389
391-425
ProfileScan PS51375 PPR 5.645 88-118
252-286
190-224
159-189
124-158
225-251
287-321
354-388
322-352
389-419
425-455
457-487
491-525
no_ID  
Coil coil coiled-coil NA 548-569
HMMPanther PTHR24015 FAMILY 1.1e-302 4-662
HMMPanther PTHR24015:SF166SUBFAMILY NOT 1.1e-302 4-662
HMMPfam PF14432 DYW_deaminase 7.9e-16 552-652
Seg seg seg NA 98-109
Wolf-PSORT
Lj4g3v1632020.2	cyto 6, nucl 4, chlo 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1632020.2