Miyakogusa Predicted Gene

Lj4g3v1632020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MKW2_SOYBN 993 83.8 90.7 (tr|K7MKW2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G74580.1 701 62.3 78.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:28020777-28023068 FORWARD LENGTH=763
Medicago Medtr4g108650.1 997 84.8 91.8 | PPR containing plant-like protein | HC | chr4:44994513-44997905 | 20130731
Soybean Glyma17g10790.1 992 83.8 90.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1632020.1 length: 567 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.043 468-497
HMMPfam PF12854 PPR_1 2.7e-09 144-174
HMMPfam PF13041 PPR_2 7.7e-19 8-57
78-127
183-232
253-302
323-372
396-443
HMMTigr TIGR00756 PPR: 0.00067 12-44
46-80
81-115
116-150
151-184
186-220
222-255
256-290
291-325
326-359
361-389
398-431
432-465
468-499
ProfileScan PS51375 PPR 9.405 9-43
44-78
79-113
114-148
149-183
184-218
219-253
254-288
289-323
324-358
359-389
395-429
430-464
465-499
no_ID  
HMMPanther PTHR24015 FAMILY 2.9e-220 1-511
HMMPanther PTHR24015:SF14 SUBFAMILY 2.9e-220 1-511
Wolf-PSORT
Lj4g3v1632020.1	cyto 8, chlo 2, mito 1, plas 1, E.R. 1, golg 1, golg_plas 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1632020.1