Miyakogusa Predicted Gene

Lj4g3v1630970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I3RSY3_LOTJA 456 85.5 85.5 (tr|I3RSY3) R2R3MYB transcription factor (Fragment) OS=Lotus japonicus GN=MYB31 PE=2 SV=1
TAIR_pep AT3G47600.1 204 44.3 53.7 | Symbols: MYB94, ATMYBCP70, ATMYB94 | myb domain protein 94 | chr3:17539627-17541035 REVERSE LENGTH=333
Medicago Medtr0489s0020.1 269 52.1 60.1 | R2R3-myb transcription factor | HC | scaffold0489:10964-9594 | 20130731
Soybean Glyma04g33720.1 275 56.2 63.4  
LJGI gnl|LJGI|TC57252 1604 99.9 99.9 homologue to UniRef100_A7PDM5 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1630970.1 length: 270 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 6.2e-13 21-66
HMMSmart SM00717 SANT 3.8e-15 20-68
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.3e-19 2-26
27-70
superfamily SSF46689 Homeodomain-like 4.2e-20 2-80
IPR017877 Myb-like domain
ProfileScan PS50090 MYB_LIKE 4.449 1-15
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 23.254 16-70
no_ID  
HMMPanther PTHR10641 MYB-LIKE 1.4e-49 2-224
HMMPanther PTHR10641:SF30 MYB 1.4e-49 2-224
Seg seg seg NA 74-95
176-190
Wolf-PSORT
Lj4g3v1630970.1	nucl 11.5, cyto_nucl 6.5, mito 1, plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1630970.1