Miyakogusa Predicted Gene
- Lj4g3v1615840.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
D7TND2_VITVI |
319 |
100.0 |
100.0 |
(tr|D7TND2) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01770 PE=3 SV=1 |
| TAIR_pep |
AT2G02760.1 |
313 |
97.4 |
100.0 |
| Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme 2 | chr2:774271-775149 FORWARD LENGTH=152 |
| Medicago |
Medtr8g468530.1 |
318 |
100.0 |
100.0 |
| ubiquitin-conjugating enzyme | HC | chr8:24841261-24835625 | 20130731 |
| Soybean |
Glyma18g16160.2 |
317 |
100.0 |
100.0 |
|
| LJGI |
gnl|LJGI|TC63220 |
916 |
100.0 |
100.0 |
UniRef100_A7Q2T4 Cluster: Ubiquitin carrier protein; n=5; Spermatophyta|Rep: Ubiquitin carrier protein - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1615840.1 |
length: 152 aa. |
| IPR000608 |
Ubiquitin-conjugating enzyme, E2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016881 |
acid-amino acid ligase activity |
|
|
| HMMPfam |
PF00179 |
UQ_con |
1.1e-52 |
8-144 |
| ProfileScan |
PS50127 |
UBIQUITIN_CONJUGAT_2 |
47.380 |
7-139 |
| IPR016135 |
Ubiquitin-conjugating enzyme/RWD-like |
| Gene3D |
G3DSA:3.10.110.10 |
no description |
7.3e-79 |
1-147 |
| superfamily |
SSF54495 |
UBC-like |
7.3e-64 |
1-144 |
| IPR023313 |
Ubiquitin-conjugating enzyme, active site |
| PatternScan |
PS00183 |
UBIQUITIN_CONJUGAT_1 |
NA |
77-92 |
| no_ID |
|
| HMMPanther |
PTHR24067 |
UBIQUITIN-CONJUGATING |
1.7e-112 |
1-149 |
| HMMPanther |
PTHR24067:SF26 |
UBIQUITIN-CONJUGATING |
1.7e-112 |
1-149 |
| HMMSmart |
SM00212 |
Ubiquitin-conjugating |
5.4e-69 |
7-150 |
- Wolf-PSORT
Lj4g3v1615840.1 nucl 6.5, cyto_nucl 5, cyto 2.5, chlo 2, mito 1, extr 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1615840.1 |
|