| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7JPX7_MEDTR | 597 | 75.0 | 83.9 | (tr|G7JPX7) Pectate lyase OS=Medicago truncatula GN=MTR_4g107870 PE=4 SV=1 |
| TAIR_pep | AT3G01270.1 | 488 | 61.4 | 74.3 | | Symbols: | Pectate lyase family protein | chr3:82892-84720 REVERSE LENGTH=475 |
| Medicago | Medtr4g107870.1 | 605 | 77.2 | 86.4 | | pectate lyase P59-like protein | HC | chr4:44708603-44710161 | 20130731 |
| Soybean | Glyma04g34260.1 | 586 | 74.0 | 84.3 | |
| LJGI | gnl|LJGI|TC77984 | 93.7 | 79.2 | 79.2 | similar to UniRef100_Q40319 Cluster: Pectate lyase homolog; n=6; Medicago sativa|Rep: Pectate lyase homolog - Medicago sativa (Alfalfa), partial (90%) |
| Lj4g3v1614780.1 | length: 368 aa. | |||
| IPR002022 | Pectate lyase/Amb allergen | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF00544 | Pec_lyase_C | 3.9e-56 | 104-288 |
| HMMSmart | SM00656 | no description | 1e-96 | 97-294 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 3.9e-103 | 22-361 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 3.4e-125 | 22-360 |
| IPR018082 | AmbAllergen | |||
| FPrintScan | PR00807 | AMBALLERGEN | 7.3e-74 | 45-62 69-94 105-121 169-190 249-268 271-290 313-337 |
| no_ID | ||||
| HMMPanther | PTHR31683 | FAMILY | 6e-190 | 13-368 |
| HMMPanther | PTHR31683:SF0 | SUBFAMILY | 6e-190 | 13-368 |
| Seg | seg | seg | NA | 48-60 |
Lj4g3v1614780.1 cyto 6, mito 4, cyto_nucl 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj4g3v1614780.1 | Not targeted | -50.542 | -3.617 | -3.172 | 75.41% | -43.753 |