Miyakogusa Predicted Gene
- Lj4g3v1614750.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KML2_SOYBN |
142 |
63.1 |
76.7 |
(tr|K7KML2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G01280.1 |
60.8 |
34.8 |
52.2 |
| Symbols: VDAC1, ATVDAC1 | voltage dependent anion channel 1 | chr3:85754-87612 FORWARD LENGTH=276 |
| Medicago |
Medtr4g107840.1 |
132 |
57.3 |
70.9 |
| porin/voltage-dependent anion-selective channel protein | HC | chr4:44696072-44694242 | 20130731 |
| Soybean |
Glyma05g01350.1 |
126 |
63.4 |
74.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1614750.1 |
length: 103 aa. |
| IPR023614 |
Porin domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.40.160.10 |
no description |
5.1e-10 |
4-99 |
| no_ID |
|
| HMMPanther |
PTHR11743 |
VOLTAGE-DEPENDENT |
2.5e-13 |
11-96 |
| HMMPanther |
PTHR11743:SF14 |
VOLTAGE-DEPENDENT |
2.5e-13 |
11-96 |
| Seg |
seg |
seg |
NA |
64-75 |
- Wolf-PSORT
Lj4g3v1614750.1 cyto 5, chlo 3, nucl 2, extr 2, cysk 1, golg 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1614750.1 |
Not targeted |
-59.438 |
-0.340 |
-13.139 |
88.09% |
-45.960
|