Miyakogusa Predicted Gene

Lj4g3v1604510.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MI98_SOYBN 1243 72.8 81.6 (tr|I1MI98) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G47300.2 622 44.2 60.2 | Symbols: | ribonuclease Ps | chr2:19418733-19422076 FORWARD LENGTH=826
Medicago Medtr4g008840.1 1161 67.7 78.4 | ribonuclease P | HC | chr4:1706291-1713206 | 20130731
Soybean Glyma16g07720.1 1211 72.1 81.5  
LJGI gnl|LJGI|TC70344 381 96.8 96.8 weakly similar to UniRef100_A7PJ62 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1604510.2 length: 849 aa.
IPR009723 Ribonuclease P/MRP, subunit POP1
method AccNumber shortName E-value location
Biological Process GO:0001682 tRNA 5'-leader removal    
Molecular Function GO:0004526 ribonuclease P activity    
HMMPfam PF06978 POP1 2e-20 26-182
IPR012590 POPLD
Molecular Function GO:0004526 ribonuclease P activity    
Biological Process GO:0006396 RNA processing    
HMMPfam PF08170 POPLD 2.1e-18 531-606
IPR018000 Neurotransmitter-gated ion-channel, conserved site
Molecular Function GO:0005230 extracellular ligand-gated ion channel activity    
Biological Process GO:0006811 ion transport    
Cellular Component GO:0016021 integral to membrane    
Cellular Component GO:0045211 postsynaptic membrane    
PatternScan PS00236 NEUROTR_ION_CHANNEL NA 566-580
no_ID  
HMMPanther PTHR22731 RIBONUCLEASE 9.2e-35 17-318
Seg seg seg NA 631-643
761-775
Wolf-PSORT
Lj4g3v1604510.2	nucl 7, chlo 5, mito 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1604510.2