Miyakogusa Predicted Gene
- Lj4g3v1601430.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JZT8_SOYBN |
920 |
74.8 |
86.3 |
(tr|I1JZT8) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G47890.1 |
587 |
52.2 |
70.3 |
| Symbols: | Ubiquitin carboxyl-terminal hydrolase-related protein | chr3:17667172-17673530 REVERSE LENGTH=1568 |
| Medicago |
Medtr4g107470.1 |
898 |
74.1 |
86.4 |
| ubiquitin carboxyl-terminal hydrolase-like protein | HC | chr4:44489527-44480714 | 20130731 |
| Soybean |
Glyma05g01490.1 |
919 |
74.8 |
86.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1601430.1 |
length: 583 aa. |
| IPR006865 |
Domain of unknown function DUF629 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04780 |
DUF629 |
4.6e-70 |
259-583 |
| IPR006866 |
Domain of unknown function DUF627, N-terminal |
| HMMPfam |
PF04781 |
DUF627 |
3.2e-09 |
1-101 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
115-136 |
| HMMPanther |
PTHR22975 |
UBIQUITIN |
5.8e-12 |
259-540 |
| HMMPanther |
PTHR22975:SF1 |
UNCHARACTERIZED |
5.8e-12 |
259-540 |
- Wolf-PSORT
Lj4g3v1601430.1 nucl 12, cyto 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1601430.1 |
|