Miyakogusa Predicted Gene

Lj4g3v1600410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MTQ0_SOYBN 1948 77.6 84.6 (tr|I1MTQ0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G74770.1 1118 49.9 64.6 | Symbols: | zinc ion binding | chr1:28089695-28094834 REVERSE LENGTH=1259
Medicago Medtr4g107440.1 1897 75.3 83.7 | zinc ion-binding protein | HC | chr4:44453747-44465290 | 20130731
Soybean Glyma17g10510.1 1909 76.4 83.6  
LJGI gnl|LJGI|TC69912 1877 99.7 99.7 similar to UniRef100_A7QI26 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1600410.1 length: 1226 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.2e-06 1142-1187
HMMSmart SM00184 Ring 0.00015 1144-1185
ProfileScan PS50089 ZF_RING_2 11.412 1144-1186
IPR008913 Zinc finger, CHY-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF05495 zf-CHY 2.8e-15 1015-1092
ProfileScan PS51266 ZF_CHY 23.811 1008-1077
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.6e-09 1141-1191
IPR017921 Zinc finger, CTCHY-type
ProfileScan PS51270 ZF_CTCHY 27.311 1080-1143
no_ID  
Coil coil coiled-coil NA 293-314
Gene3D G3DSA:1.20.120.520 no description 6.9e-20 40-207
500-513
837-838
HMMPanther PTHR21319 RING 5.1e-197 37-1226
Seg seg seg NA 14-29
543-553
superfamily SSF57850 RING/U-box 1.9e-12 1137-1207
Wolf-PSORT
Lj4g3v1600410.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1600410.1