Miyakogusa Predicted Gene

Lj4g3v1584860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MKT2_SOYBN 1495 83.5 90.2 (tr|K7MKT2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G74850.1 1264 73.7 86.2 | Symbols: PTAC2 | plastid transcriptionally active 2 | chr1:28119237-28122314 REVERSE LENGTH=862
Medicago Medtr4g107210.1 1489 84.5 91.3 | PPR containing plant-like protein | HC | chr4:44279533-44285674 | 20130731
Soybean Glyma05g01650.1 1471 85.9 93.0  
LJGI gnl|LJGI|TC68468 835 99.8 99.8 homologue to UniRef100_A7PD90 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1584860.1 length: 848 aa.
IPR002625 Smr protein/MutS2 C-terminal
method AccNumber shortName E-value location
HMMSmart SM00463 Small 1.7e-06 694-783
ProfileScan PS50828 SMR 11.970 697-786
IPR002885 Pentatricopeptide repeat
HMMPfam PF01535 PPR 0.28 127-156
303-331
408-437
443-470
478-506
583-609
HMMPfam PF13041 PPR_2 1.7e-07 159-207
229-276
334-381
510-558
HMMTigr TIGR00756 PPR: 1.5e-05 127-158
162-194
197-231
232-266
268-301
303-336
338-370
373-405
408-440
478-510
513-546
ProfileScan PS51375 PPR 7.191 88-118
124-158
159-193
194-229
230-264
265-299
300-334
335-369
370-404
405-439
440-474
475-509
510-544
545-579
580-614
651-685
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00018 302-429
442-610
no_ID  
HMMPanther PTHR24015 FAMILY 3e-151 5-611
HMMPanther PTHR24015:SF0 SUBFAMILY 3e-151 5-611
Seg seg seg NA 790-798
Wolf-PSORT
Lj4g3v1584860.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1584860.1