Miyakogusa Predicted Gene

Lj4g3v1562770.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JZV3_SOYBN 748 70.6 79.4 (tr|I1JZV3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G62580.1 406 44.7 59.1 | Symbols: | ARM repeat superfamily protein | chr5:25120010-25122259 FORWARD LENGTH=615
Medicago Medtr4g107110.1 761 69.8 79.5 | microtubule-associated TORTIFOLIA-like protein | HC | chr4:44240560-44242921 | 20130731
Soybean Glyma05g01680.5 748 70.6 79.4  
LJGI gnl|LJGI|TC65232 1346 99.9 99.9 weakly similar to UniRef100_A7PD93 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1562770.1 length: 537 aa.
IPR000357 HEAT
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02985 HEAT 2.9e-05 208-236
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.3e-44 13-299
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.6e-27 5-272
IPR026003 HEAT repeat associated with sister chromatid cohesion protein
HMMPfam PF12765 Cohesin_HEAT 0.0001 86-109
no_ID  
HMMPanther PTHR31355 FAMILY 1.2e-172 1-536
Seg seg seg NA 141-152
286-295
Wolf-PSORT
Lj4g3v1562770.1	nucl 6, chlo 5, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1562770.1 Not targeted -25.531 -1.943 -0.614 21.69% -22.974