Miyakogusa Predicted Gene

Lj4g3v1561740.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SP01_LOTJA 244 100.0 100.0 (tr|I3SP01) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G48100.1 191 87.4 95.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulator 5 | chr3:17759112-17760740 REVERSE LENGTH=184
Medicago Medtr3g078613.1 190 81.5 87.1 | two-component response regulator ARR3-like protein | HC | chr3:35427921-35430565 | 20130731
Soybean Glyma17g10170.2 194 79.2 88.0  
LJGI gnl|LJGI|TC62739 710 99.5 99.5 similar to UniRef100_A7PD82 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1561740.2 length: 122 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 phosphorelay response regulator activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 6.5e-14 22-115
HMMSmart SM00448 cheY-homologous 0.0077 20-120
ProfileScan PS50110 RESPONSE_REGULATORY 19.721 21-122
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 1e-18 17-113
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 1.2e-24 17-116
HMMPanther PTHR26402 RESPONSE 3.4e-53 15-122
HMMPanther PTHR26402:SF256TWO-COMPONENT RESPONSE 3.4e-53 15-122
Wolf-PSORT
Lj4g3v1561740.2	nucl 6.5, cyto_nucl 5, chlo 4, cyto 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1561740.2