Miyakogusa Predicted Gene

Lj4g3v1561700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1MTL6_SOYBN 536 69.9 82.8 (tr|I1MTL6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G48160.2 347 53.8 69.1 | Symbols: DEL1, E2L3, E2FE | DP-E2F-like 1 | chr3:17783641-17785846 FORWARD LENGTH=403
Medicago Medtr4g106540.3 527 70.3 80.1 | E2F transcription factor-E2FE-like protein | HC | chr4:44194429-44190467 | 20130731
Soybean Glyma17g10130.1 536 69.9 82.8  
LJGI gnl|LJGI|GO012178 141 83.3 83.3 similar to UniRef100_A7PD78 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1561700.1 length: 383 aa.
IPR003316 Transcription factor E2F/dimerisation partner (TDP)
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005667 transcription factor complex    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02319 E2F_TDP 1.8e-21 22-87
156-236
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 5.6e-23 18-88
152-238
IPR015633 E2F Family
HMMPanther PTHR12081 TRANSCRIPTION 8.2e-124 16-381
no_ID  
HMMPanther PTHR12081:SF7 TRANSCRIPTION 8.2e-124 16-381
Seg seg seg NA 2-15
182-193
superfamily SSF46785 "Winged 2.8e-16 21-86
155-235
Wolf-PSORT
Lj4g3v1561700.1	nucl 11, nucl_plas 7, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1561700.1