Miyakogusa Predicted Gene
- Lj4g3v1539290.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7L7I0_MEDTR |
853 |
67.8 |
77.8 |
(tr|G7L7I0) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_8g020780 PE=4 SV=1 |
| TAIR_pep |
AT5G45540.1 |
315 |
31.3 |
49.3 |
| Symbols: | Protein of unknown function (DUF594) | chr5:18458294-18460705 REVERSE LENGTH=803 |
| Medicago |
Medtr8g020780.1 |
853 |
67.8 |
77.8 |
| DUF594 family protein | LC | chr8:7329752-7327151 | 20130731 |
| Soybean |
Glyma20g33500.1 |
472 |
43.5 |
59.1 |
|
| LJGI |
gnl|LJGI|TC75229 |
190 |
88.1 |
88.1 |
similar to UniRef100_A7P6I5 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1539290.1 |
length: 622 aa. |
| IPR007658 |
Protein of unknown function DUF594 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04578 |
DUF594 |
6.8e-20 |
551-604 |
| IPR025315 |
Domain of unknown function DUF4220 |
| HMMPfam |
PF13968 |
DUF4220 |
9.5e-68 |
1-306 |
| no_ID |
|
| HMMPanther |
PTHR31325 |
FAMILY |
7.6e-124 |
1-620 |
| HMMPanther |
PTHR31325:SF0 |
SUBFAMILY |
7.6e-124 |
1-620 |
- Wolf-PSORT
Lj4g3v1539290.1 nucl 3, cyto 3, plas 3, cyto_nucl 3, nucl_plas 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1539290.1 |
|