Miyakogusa Predicted Gene

Lj4g3v1535110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JNT8_MEDTR 1861 78.6 88.9 (tr|G7JNT8) Rna-dependent RNA polymerase OS=Medicago truncatula GN=MTR_4g106660 PE=4 SV=1
TAIR_pep AT4G11130.1 1395 60.6 75.0 | Symbols: RDR2, SMD1 | RNA-dependent RNA polymerase 2 | chr4:6780522-6784390 FORWARD LENGTH=1133
Medicago Medtr4g106660.1 1864 78.6 88.9 | RNA-dependent RNA polymerase family protein | HC | chr4:44020611-44014643 | 20130731
Soybean Glyma05g02000.1 1799 77.8 87.6  
LJGI gnl|LJGI|TC60008 1382 100.0 100.0 similar to UniRef100_A7PD40 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1535110.1 length: 1122 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
ProfileScan PS50102 RRM 8.774 8-91
IPR000909 Phospholipase C, phosphatidylinositol-specific , X domain
ProfileScan PS50007 PIPLC_X_DOMAIN 9.355 123-183
IPR007855 RNA-dependent RNA polymerase, eukaryotic-type
Molecular Function GO:0003968 RNA-directed RNA polymerase activity    
HMMPanther PTHR23079 RNA-DEPENDENT 3.5e-220 370-1114
HMMPfam PF05183 RdRP 1.9e-175 384-971
no_ID  
superfamily SSF54928 RNA-binding 4.2e-06 4-109
Wolf-PSORT
Lj4g3v1535110.1	cyto 7, nucl 3, chlo 2, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1535110.1