Miyakogusa Predicted Gene

Lj4g3v1535060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T487_LOTJA 296 84.4 84.4 (tr|I3T487) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G24450.1 164 55.7 70.0 | Symbols: NFD2 | Ribonuclease III family protein | chr1:8664201-8665077 FORWARD LENGTH=191
Medicago Medtr4g106640.1 222 73.1 80.1 | ribonuclease III | HC | chr4:44006858-44007973 | 20130731
Soybean Glyma17g09900.1 241 75.7 84.9  
LJGI gnl|LJGI|TC59807 1061 99.6 99.6  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1535060.1 length: 179 aa.
IPR000999 Ribonuclease III domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004525 ribonuclease III activity    
Biological Process GO:0006396 RNA processing    
Gene3D G3DSA:1.10.1520.10 no description 1.1e-20 36-158
HMMSmart SM00535 Ribonuclease 6.5e-17 51-178
ProfileScan PS50142 RNASE_3_2 15.179 36-155
superfamily SSF69065 RNase 1.2e-20 32-155
IPR011907 Ribonuclease III
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004525 ribonuclease III activity    
Biological Process GO:0016075 rRNA catabolic process    
HMMPanther PTHR11207 RIBONUCLEASE 9.7e-20 36-155
no_ID  
Seg seg seg NA 6-21
141-152
Wolf-PSORT
Lj4g3v1535060.1	chlo 6, mito 2, extr 2, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1535060.1