Miyakogusa Predicted Gene

Lj4g3v1534900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MTI6_SOYBN 876 63.9 75.8 (tr|I1MTI6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G60190.1 433 35.7 55.8 | Symbols: | ARM repeat superfamily protein | chr1:22198403-22200463 FORWARD LENGTH=686
Medicago Medtr4g107010.1 868 64.6 74.7 | spotted leaf protein, putative | HC | chr4:43987097-43984111 | 20130731
Soybean Glyma17g09850.1 876 63.9 75.8  
LJGI gnl|LJGI|BW609027 767 99.5 99.5 weakly similar to UniRef100_A7Q2D4 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1534900.1 length: 698 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 0.00023 419-460
547-583
HMMSmart SM00185 Armadillo/beta-catenin-like 0.1 415-461
462-503
546-587
ProfileScan PS50176 ARM_REPEAT 9.012 427-474
557-600
IPR003613 U box domain
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 2.4e-20 285-354
HMMSmart SM00504 Modified 2.7e-29 287-350
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 2e-34 388-670
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.1e-28 285-355
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 8.1e-29 382-672
no_ID  
HMMPanther PTHR23315 BETA 3.4e-68 23-679
HMMPanther PTHR23315:SF7 ANKYRIN-REPEAT-ARM 3.4e-68 23-679
Seg seg seg NA 30-41
373-382
579-595
630-641
superfamily SSF57850 RING/U-box 3.5e-25 285-363
Wolf-PSORT
Lj4g3v1534900.1	chlo 8, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1534900.1