Miyakogusa Predicted Gene
- Lj4g3v1511470.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KVS9_SOYBN |
224 |
69.4 |
77.7 |
(tr|K7KVS9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G27500.1 |
185 |
58.8 |
73.2 |
| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:9551629-9553654 REVERSE LENGTH=650 |
| Medicago |
Medtr4g106900.1 |
215 |
74.3 |
81.9 |
| kinesin light chain | HC | chr4:43927843-43925533 | 20130731 |
| Soybean |
Glyma06g19430.1 |
223 |
69.4 |
77.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1511470.1 |
length: 157 aa. |
| IPR011990 |
Tetratricopeptide-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Gene3D |
G3DSA:1.25.40.10 |
no description |
5.3e-06 |
3-100 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
44-65 |
| HMMPanther |
PTHR19959 |
KINESIN |
1.2e-18 |
1-130 |
| HMMPfam |
PF13424 |
TPR_12 |
2e-09 |
31-103 |
| Seg |
seg |
seg |
NA |
44-57 |
| superfamily |
SSF48452 |
TPR-like |
3.8e-07 |
2-135 |
- Wolf-PSORT
Lj4g3v1511470.1 chlo 4, nucl 3, cyto 3, cyto_nucl 3, chlo_mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1511470.1 |
|