Miyakogusa Predicted Gene

Lj4g3v1511450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K006_SOYBN 877 89.9 94.5 (tr|I1K006) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G62790.1 786 81.4 88.9 | Symbols: DXR, PDE129 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | chr5:25214358-25217292 REVERSE LENGTH=477
Medicago Medtr4g106870.1 877 89.3 94.7 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | HC | chr4:43911321-43906312 | 20130731
Soybean Glyma05g02190.1 877 89.9 94.5  
LJGI gnl|LJGI|TC59789 1417 100.0 100.0 similar to UniRef100_A7PD04 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1511450.1 length: 472 aa.
IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase
method AccNumber shortName E-value location
Biological Process GO:0008299 isoprenoid biosynthetic process    
Molecular Function GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
HAMAP MF_00183 DXP_reductoisom 45.404 78-461
HMMPIR PIRSF006205 1-deoxy-D-xylulose 1e-240 75-468
HMMPanther PTHR30525 1-DEOXY-D-XYLULOSE 4.6e-225 56-471
HMMTigr TIGR00243 Dxr: 1.4e-157 76-458
IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal
Biological Process GO:0055114 oxidation-reduction process    
Molecular Function GO:0070402 NADPH binding    
HMMPfam PF02670 DXP_reductoisom 1.9e-46 78-206
IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal
Molecular Function GO:0005515 protein binding    
HMMPfam PF08436 DXP_redisom_C 3.3e-38 220-303
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 5.6e-62 69-224
IPR026877 DXP reductoisomerase C-terminal domain
HMMPfam PF13288 DXPR_C 1.3e-41 335-458
superfamily SSF69055 1-deoxy-D-xylulose-5-phosphate 2.2e-30 368-467
no_ID  
Coil coil coiled-coil NA 129-150
Gene3D G3DSA:1.10.1740.10 no description 8.8e-28 381-461
HMMPanther PTHR30525:SF0 1-DEOXY-D-XYLULOSE 4.6e-225 56-471
superfamily SSF51735 NAD(P)-binding 5.1e-49 74-224
superfamily SSF55347 Glyceraldehyde-3-phosphate 1.1e-60 201-338
Wolf-PSORT
Lj4g3v1511450.1	cyto 7, cysk 3, chlo 2, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1511450.1