Miyakogusa Predicted Gene
- Lj4g3v1478260.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MCE9_SOYBN |
102 |
63.2 |
71.1 |
(tr|K7MCE9) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT5G44550.1 |
69.7 |
44.2 |
62.3 |
| Symbols: | Uncharacterised protein family (UPF0497) | chr5:17942100-17943174 REVERSE LENGTH=197 |
| Medicago |
Medtr0097s0070.1 |
102 |
63.6 |
72.7 |
| CASP POPTRDRAFT-like protein | HC | scaffold0097:39509-37693 | 20130731 |
| Soybean |
Glyma15g22100.1 |
102 |
63.2 |
71.1 |
|
| LJGI |
gnl|LJGI|GO036682 |
373 |
95.7 |
95.7 |
weakly similar to UniRef100_Q9FI10 Cluster: UPF0497 membrane protein At5g44550; n=1; Arabidopsis thaliana|Rep: UPF0497 membrane protein At5g44550 - Arabidopsis thaliana (Mouse-ear cress), partial (46%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1478260.1 |
length: 77 aa. |
| IPR006459 |
Uncharacterised protein family UPF0497, trans-membrane plant subgroup |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMTigr |
TIGR01569 |
A_tha_TIGR01569: |
7.7e-20 |
2-77 |
| IPR006702 |
Uncharacterised protein family UPF0497, trans-membrane plant |
| HMMPfam |
PF04535 |
DUF588 |
1.9e-16 |
14-76 |
| no_ID |
|
| HMMPanther |
PTHR11615 |
NITRATE, |
5.2e-18 |
1-77 |
| HMMPanther |
PTHR11615:SF59 |
INTEGRAL |
5.2e-18 |
1-77 |
| Seg |
seg |
seg |
NA |
32-42 |
- Wolf-PSORT
Lj4g3v1478260.1 cyto 3, mito 2, plas 2, extr 2, vacu 2, cyto_nucl 2, mito_plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1478260.1 |
|