Miyakogusa Predicted Gene
- Lj4g3v1477210.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S6B9_LOTJA |
296 |
99.3 |
99.3 |
(tr|I3S6B9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G62930.1 |
209 |
67.9 |
83.6 |
| Symbols: | SGNH hydrolase-type esterase superfamily protein | chr5:25254912-25256357 FORWARD LENGTH=242 |
| Medicago |
Medtr4g105680.1 |
218 |
80.7 |
89.3 |
| GDSL esterase/lipase plant-like protein | HC | chr4:43874069-43869992 | 20130731 |
| Soybean |
Glyma17g09650.1 |
249 |
83.6 |
90.7 |
|
| LJGI |
gnl|LJGI|TC68534 |
831 |
99.8 |
99.8 |
weakly similar to UniRef100_A7PCY9 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1477210.2 |
length: 168 aa. |
| IPR001087 |
Lipase, GDSL |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006629 |
lipid metabolic process |
|
|
| Molecular Function |
GO:0016788 |
hydrolase activity, acting on ester bonds |
|
|
| HMMPfam |
PF00657 |
Lipase_GDSL |
6.8e-19 |
29-150 |
| IPR013831 |
SGNH hydrolase-type esterase domain |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| Gene3D |
G3DSA:3.40.50.1110 |
no description |
1.7e-25 |
27-152 |
| no_ID |
|
| HMMPanther |
PTHR32130 |
FAMILY |
9.4e-55 |
14-154 |
| HMMPanther |
PTHR32130:SF0 |
SUBFAMILY |
9.4e-55 |
14-154 |
| superfamily |
SSF52266 |
SGNH |
4.8e-16 |
19-153 |
- Wolf-PSORT
Lj4g3v1477210.2 cyto 7.5, cyto_E.R. 4.5, chlo 1, nucl 1, mito 1, plas 1, vacu 1, cysk 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1477210.2 |
|