Miyakogusa Predicted Gene

Lj4g3v1474100.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K020_SOYBN 1260 75.3 81.7 (tr|I1K020) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G20140.1 645 44.2 58.4 | Symbols: GSO1 | Leucine-rich repeat transmembrane protein kinase | chr4:10884220-10888045 FORWARD LENGTH=1249
Medicago Medtr4g105520.1 1188 71.6 79.4 | LRR receptor-like kinase | HC | chr4:43789680-43793021 | 20130731
Soybean Glyma05g02370.1 1235 75.0 81.5  
LJGI gnl|LJGI|TC80812 109 95.5 95.5  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1474100.2 length: 880 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.36 106-128
586-606
685-704
ProfileScan PS51450 LRR 6.026 106-129
130-152
202-223
250-273
274-296
298-320
322-344
347-368
371-393
395-417
491-513
515-537
563-585
586-606
610-632
634-655
658-681
682-704
706-728
754-776
803-826
827-848
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 40 104-128
152-176
200-223
248-271
272-295
296-319
320-345
393-417
489-513
632-656
680-704
728-751
801-820
825-848
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 2.2e-10 40-76
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1.8e-06 297-334
no_ID  
FPrintScan PR00019 LEURICHRPT 1.4e-05 299-312
825-838
Gene3D G3DSA:3.80.10.10 no description 5.3e-55 40-327
328-447
448-567
568-642
643-854
HMMPanther PTHR24420 FAMILY 9e-195 111-868
HMMPanther PTHR24420:SF159SUBFAMILY NOT 9e-195 111-868
HMMPfam PF13504 LRR_7 4.5 394-411
HMMPfam PF13516 LRR_6 0.75 200-220
369-390
HMMPfam PF13855 LRR_8 1.8e-07 226-285
610-669
783-838
HMMSmart SM00365 Leucine-rich 3.8e+02 200-226
272-295
296-325
561-583
632-658
Seg seg seg NA 89-98
123-139
243-256
415-432
705-718
825-838
superfamily SSF52058 L 3e-63 35-343
605-869
335-607
Wolf-PSORT
Lj4g3v1474100.2	chlo 7, nucl 2, extr 2, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1474100.2