Miyakogusa Predicted Gene

Lj4g3v1474100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K020_SOYBN 1260 75.3 81.7 (tr|I1K020) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G20140.1 645 44.2 58.4 | Symbols: GSO1 | Leucine-rich repeat transmembrane protein kinase | chr4:10884220-10888045 FORWARD LENGTH=1249
Medicago Medtr4g105520.1 1186 71.6 79.4 | LRR receptor-like kinase | HC | chr4:43789680-43793021 | 20130731
Soybean Glyma05g02370.1 1235 75.0 81.5  
LJGI gnl|LJGI|TC80812 109 95.5 95.5  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1474100.1 length: 870 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 1.2 96-118
576-596
675-694
696-718
ProfileScan PS51450 LRR 6.026 96-119
120-142
192-213
240-263
264-286
288-310
312-334
337-358
361-383
385-407
481-503
505-527
553-575
576-596
600-622
624-645
648-671
672-694
696-718
744-766
793-816
817-838
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 40 94-118
142-166
190-213
238-261
262-285
286-309
310-335
383-407
479-503
622-646
670-694
718-741
791-810
815-838
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 2.2e-10 30-66
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1.8e-06 287-324
no_ID  
FPrintScan PR00019 LEURICHRPT 1.4e-05 289-302
815-828
Gene3D G3DSA:3.80.10.10 no description 2.9e-27 30-250
251-472
473-587
588-746
747-846
HMMPanther PTHR24420 FAMILY 9e-195 101-858
HMMPanther PTHR24420:SF159SUBFAMILY NOT 9e-195 101-858
HMMPfam PF13504 LRR_7 4.5 384-401
HMMPfam PF13516 LRR_6 0.74 190-210
359-380
HMMPfam PF13855 LRR_8 1.8e-07 216-275
600-659
773-828
HMMSmart SM00365 Leucine-rich 3.8e+02 190-216
262-285
286-315
551-573
622-648
Seg seg seg NA 79-88
113-129
233-246
405-422
695-708
815-828
superfamily SSF52058 L 3e-63 25-333
595-859
325-597
Wolf-PSORT
Lj4g3v1474100.1	extr 4, plas 3, chlo 2, cyto 2, nucl_plas 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1474100.1