Miyakogusa Predicted Gene
- Lj4g3v1451990.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KMS8_SOYBN |
417 |
70.3 |
83.6 |
(tr|K7KMS8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G24670.2 |
305 |
56.7 |
74.8 |
| Symbols: TAR2 | tryptophan aminotransferase related 2 | chr4:12727940-12730694 REVERSE LENGTH=440 |
| Medicago |
Medtr4g105220.1 |
408 |
73.9 |
84.0 |
| tryptophan aminotransferase-like protein | HC | chr4:43620078-43611194 | 20130731 |
| Soybean |
Glyma04g36040.1 |
318 |
77.1 |
87.5 |
|
| LJGI |
gnl|LJGI|BP044035 |
396 |
99.5 |
99.5 |
similar to UniRef100_A7PCU3 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1451990.1 |
length: 276 aa. |
| IPR006947 |
EGF-like, alliinase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016846 |
carbon-sulfur lyase activity |
|
|
| Gene3D |
G3DSA:2.10.25.30 |
no description |
1.3e-14 |
72-115 |
| IPR006948 |
Allinase, C-terminal |
| Molecular Function |
GO:0016846 |
carbon-sulfur lyase activity |
|
|
| HMMPfam |
PF04864 |
Alliinase_C |
7.3e-82 |
78-274 |
| IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| Gene3D |
G3DSA:3.40.640.10 |
no description |
1.7e-39 |
126-275 |
| IPR015424 |
Pyridoxal phosphate-dependent transferase |
| superfamily |
SSF53383 |
PLP-dependent |
9.7e-40 |
44-274 |
| no_ID |
|
| HMMPanther |
PTHR11751 |
SUBGROUP |
6.4e-108 |
75-274 |
| HMMPanther |
PTHR11751:SF127SUBFAMILY |
NOT |
6.4e-108 |
75-274 |
- Wolf-PSORT
Lj4g3v1451990.1 cyto 3, E.R. 3, cyto_E.R. 3, chlo 2, mito 2, vacu 2, cyto_nucl 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1451990.1 |
|