| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1K037_SOYBN | 792 | 79.7 | 87.3 | (tr|I1K037) Histone deacetylase OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT5G63110.1 | 702 | 72.3 | 83.0 | | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | histone deacetylase 6 | chr5:25315834-25318227 REVERSE LENGTH=471 |
| Medicago | Medtr3g077160.1 | 756 | 78.4 | 87.1 | | histone deacetylase family protein | HC | chr3:34636818-34643051 | 20130731 |
| Soybean | Glyma05g02540.1 | 792 | 79.7 | 87.3 | |
| LJGI | gnl|LJGI|TC59998 | 1394 | 100.0 | 100.0 | homologue to UniRef100_A7PCT8 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%) |
| Lj4g3v1440870.1 | length: 468 aa. | |||
| IPR000286 | Histone deacetylase superfamily | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| FPrintScan | PR01270 | HDASUPER | 1.1e-23 | 154-177 186-201 271-281 |
| HMMPanther | PTHR10625 | HISTONE | 6.1e-271 | 23-460 |
| IPR003084 | Histone deacetylase | |||
| Molecular Function | GO:0004407 | histone deacetylase activity | ||
| Biological Process | GO:0016575 | histone deacetylation | ||
| FPrintScan | PR01271 | HISDACETLASE | 7e-60 | 45-62 78-96 111-128 132-152 173-189 232-245 249-267 |
| HMMPIR | PIRSF037913 | Histone | 5.5e-298 | 22-464 |
| IPR023801 | Histone deacetylase domain | |||
| Gene3D | G3DSA:3.40.800.20 | no description | 5.3e-126 | 21-399 |
| HMMPfam | PF00850 | Hist_deacetyl | 2.9e-88 | 40-335 |
| no_ID | ||||
| HMMPanther | PTHR10625:SF28 | HISTONE | 6.1e-271 | 23-460 |
| Seg | seg | seg | NA | 400-413 427-440 |
| superfamily | SSF52768 | Arginase/deacetylase | 1e-133 | 24-391 |
Lj4g3v1440870.1 nucl 5, cyto 3, cysk 3, nucl_plas 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj4g3v1440870.1 |