| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1K037_SOYBN | 629 | 87.3 | 93.1 | (tr|I1K037) Histone deacetylase OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT5G63110.1 | 580 | 81.9 | 92.1 | | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | histone deacetylase 6 | chr5:25315834-25318227 REVERSE LENGTH=471 |
| Medicago | Medtr3g077160.1 | 600 | 85.8 | 94.0 | | histone deacetylase family protein | HC | chr3:34636818-34643051 | 20130731 |
| Soybean | Glyma05g02540.1 | 629 | 87.3 | 93.1 | |
| LJGI | gnl|LJGI|TC59998 | 1029 | 94.1 | 94.1 | homologue to UniRef100_A7PCT8 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%) |
| Lj4g3v1440790.1 | length: 344 aa. | |||
| IPR000286 | Histone deacetylase superfamily | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| FPrintScan | PR01270 | HDASUPER | 4.8e-24 | 158-181 190-205 275-285 |
| HMMPanther | PTHR10625 | HISTONE | 1.5e-227 | 27-344 |
| IPR003084 | Histone deacetylase | |||
| Molecular Function | GO:0004407 | histone deacetylase activity | ||
| Biological Process | GO:0016575 | histone deacetylation | ||
| FPrintScan | PR01271 | HISDACETLASE | 4.1e-60 | 49-66 82-100 115-132 136-156 177-193 236-249 253-271 |
| HMMPIR | PIRSF037913 | Histone | 1.1e-218 | 26-344 |
| IPR023801 | Histone deacetylase domain | |||
| Gene3D | G3DSA:3.40.800.20 | no description | 1.7e-113 | 25-342 |
| HMMPfam | PF00850 | Hist_deacetyl | 6e-88 | 44-339 |
| no_ID | ||||
| HMMPanther | PTHR10625:SF28 | HISTONE | 1.5e-227 | 27-344 |
| Seg | seg | seg | NA | 4-12 |
| superfamily | SSF52768 | Arginase/deacetylase | 7.7e-119 | 28-342 |
Lj4g3v1440790.1 cyto 10, cysk 2, nucl 1, plas 1, nucl_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj4g3v1440790.1 |