Miyakogusa Predicted Gene
- Lj4g3v1440680.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MKM2_SOYBN |
332 |
70.9 |
80.6 |
(tr|K7MKM2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G47740.1 |
100 |
38.2 |
63.4 |
| Symbols: | Adenine nucleotide alpha hydrolases-like superfamily protein | chr5:19338688-19339683 FORWARD LENGTH=244 |
| Medicago |
Medtr4g105090.1 |
336 |
69.7 |
81.1 |
| universal stress family protein | HC | chr4:43538822-43541072 | 20130731 |
| Soybean |
Glyma17g00880.1 |
113 |
48.4 |
67.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1440680.1 |
length: 253 aa. |
| IPR006016 |
UspA |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006950 |
response to stress |
|
|
| HMMPfam |
PF00582 |
Usp |
1.9e-06 |
134-241 |
| IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
| Gene3D |
G3DSA:3.40.50.620 |
no description |
1.1e-09 |
133-238 |
| no_ID |
|
| superfamily |
SSF52402 |
Adenine |
3.8e-08 |
122-251 |
- Wolf-PSORT
Lj4g3v1440680.1 cyto 5, nucl 2, vacu 2, chlo 1, mito 1, E.R. 1, pero 1, cysk 1, chlo_mito 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1440680.1 |
|