Miyakogusa Predicted Gene

Lj4g3v1438580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K044_SOYBN 705 68.5 80.3 (tr|I1K044) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G05850.1 501 53.0 66.9 | Symbols: PIRL1 | plant intracellular ras group-related LRR 1 | chr5:1762691-1764609 REVERSE LENGTH=506
Medicago Medtr4g105010.1 680 68.5 79.1 | plant intracellular ras group-related LRR protein | HC | chr4:43507045-43502952 | 20130731
Soybean Glyma05g02620.1 682 68.2 80.1  
LJGI gnl|LJGI|TC65672 718 100.0 100.0 similar to UniRef100_A7PCS2 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1438580.1 length: 527 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.046 242-263
ProfileScan PS51450 LRR 5.386 242-263
265-286
288-309
311-332
335-356
358-379
381-401
406-427
429-449
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 1.3e+02 240-262
263-285
286-309
310-332
333-356
379-403
404-426
427-450
no_ID  
Coil coil coiled-coil NA 157-178
Gene3D G3DSA:3.80.10.10 no description 3.1e-60 215-448
HMMPanther PTHR23155 LEUCINE-RICH 1.4e-119 219-462
HMMPanther PTHR23155:SF34 LEUCINE-RICH 1.4e-119 219-462
HMMPfam PF13504 LRR_7 7 358-373
HMMPfam PF13855 LRR_8 1.6e-10 265-322
380-440
HMMSmart SM00364 Leucine-rich 7.6 240-259
263-282
286-305
309-328
333-352
356-375
379-400
404-423
Seg seg seg NA 20-37
42-54
183-209
superfamily SSF52058 L 1.5e-53 219-440
Wolf-PSORT
Lj4g3v1438580.1	chlo 5.5, nucl 5, chlo_mito 4, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1438580.1