Miyakogusa Predicted Gene

Lj4g3v1425330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KMT9_SOYBN 648 83.8 87.5 (tr|K7KMT9) Elongation factor Tu OS=Glycine max PE=3 SV=1
TAIR_pep AT4G20360.1 621 80.1 85.4 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476
Medicago Medtr3g076660.1 619 83.5 87.2 | elongation factor Tu protein | HC | chr3:34457933-34460232 | 20130731
Soybean Glyma05g02670.1 648 83.8 87.5  
LJGI gnl|LJGI|TC72476 2236 99.9 99.9 homologue to UniRef100_P46280 Cluster: Elongation factor Tu, chloroplast precursor; n=1; Glycine max|Rep: Elongation factor Tu, chloroplast precursor - Glycine max (Soybean), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1425330.1 length: 376 aa.
IPR000795 Elongation factor, GTP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00315 ELONGATNFCT 5.7e-16 25-33
45-55
61-72
98-107
HMMPfam PF00009 GTP_EFTU 4.1e-46 15-178
PatternScan PS00301 EFACTOR_GTP NA 18-33
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03143 GTP_EFTU_D3 3.7e-34 276-374
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 1e-18 202-271
IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle
Molecular Function GO:0003746 translation elongation factor activity    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006414 translational elongation    
HMMTigr TIGR00485 EF-Tu: 1.5e-204 2-376
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 1.8e-33 182-278
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
superfamily SSF50465 EF-Tu/eEF-1alpha/eIF2-gamma 3.4e-34 275-376
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 7.6e-53 17-203
no_ID  
Gene3D G3DSA:2.40.30.10 no description 5.6e-41 187-275
277-375
Gene3D G3DSA:3.40.50.300 no description 5.5e-53 12-186
HMMPanther PTHR23115 TRANSLATION 6.4e-234 1-376
HMMPanther PTHR23115:SF44 GTPBP2 6.4e-234 1-376
Seg seg seg NA 105-125
219-237
Wolf-PSORT
Lj4g3v1425330.1	cyto 12, pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1425330.1