Miyakogusa Predicted Gene

Lj4g3v1389250.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MUL4_SOYBN 570 62.2 73.3 (tr|I1MUL4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G48440.1 370 55.6 73.3 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr3:17941402-17943576 FORWARD LENGTH=448
Medicago Medtr4g104260.1 558 55.4 65.4 | zinc finger C-x8-C-x5-C-x3-H type family protein | HC | chr4:43094920-43090696 | 20130731
Soybean Glyma17g13580.1 570 62.2 73.3  
LJGI gnl|LJGI|AV409227 846 100.0 100.0 similar to UniRef100_A7PCK0 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1389250.2 length: 514 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00015 275-294
HMMPfam PF00642 zf-CCCH 7.2e-08 182-204
230-250
272-295
401-427
449-472
HMMSmart SM00356 zinc 0.00014 178-205
225-252
269-296
400-427
446-473
ProfileScan PS50103 ZF_C3H1 14.821 178-206
225-253
269-297
400-428
446-474
no_ID  
HMMPanther PTHR12506 PROTEIN 9.4e-115 173-481
HMMPanther PTHR12506:SF11 ZINC 9.4e-115 173-481
Seg seg seg NA 27-40
45-53
122-131
149-159
319-328
superfamily SSF90229 CCCH 5.3e-05 441-480
395-434
264-297
173-212
220-259
Wolf-PSORT
Lj4g3v1389250.2	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1389250.2 Not targeted -17.172 -0.126 -1.849 9.52% -15.197