Miyakogusa Predicted Gene
- Lj4g3v1389230.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SXM4_LOTJA |
379 |
96.8 |
98.4 |
(tr|I3SXM4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G40010.1 |
156 |
51.8 |
67.1 |
| Symbols: | Ribosomal protein L10 family protein | chr2:16708578-16710448 REVERSE LENGTH=317 |
| Medicago |
Medtr7g022400.1 |
336 |
85.6 |
94.1 |
| ribosomal protein L10 family protein | HC | chr7:7219598-7222153 | 20130731 |
| Soybean |
Glyma02g42270.1 |
348 |
87.7 |
94.7 |
|
| LJGI |
gnl|LJGI|TC66594 |
813 |
93.1 |
93.1 |
similar to UniRef100_A7Q3E0 Cluster: 60S acidic ribosomal protein P0; n=1; Vitis vinifera|Rep: 60S acidic ribosomal protein P0 - Vitis vinifera (Grape), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1389230.1 |
length: 187 aa. |
| IPR001790 |
Ribosomal protein L10/acidic P0 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Biological Process |
GO:0042254 |
ribosome biogenesis |
|
|
| HMMPfam |
PF00466 |
Ribosomal_L10 |
1.4e-20 |
6-104 |
| no_ID |
|
| HMMPanther |
PTHR21141 |
60S |
2.7e-45 |
7-110 |
- Wolf-PSORT
Lj4g3v1389230.1 nucl 3, plas 3, nucl_plas 3, chlo 2, E.R. 2, cyto_nucl 2, cysk_nucl 2, cysk_plas 2, mito_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1389230.1 |
|