Miyakogusa Predicted Gene

Lj4g3v1389210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SIL6_LOTJA 528 99.6 100.0 (tr|I3SIL6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G24440.1 282 57.1 71.4 | Symbols: | RING/U-box superfamily protein | chr1:8662340-8663777 FORWARD LENGTH=251
Medicago Medtr8g079910.1 288 58.1 73.4 | RING finger protein | HC | chr8:34299074-34296406 | 20130731
Soybean Glyma05g02960.1 330 64.5 74.6  
LJGI gnl|LJGI|TC82524 79.8 88.2 88.2 similar to UniRef100_A7QBV4 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1389210.1 length: 254 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 0.00016 158-195
ProfileScan PS50089 ZF_RING_2 11.796 158-196
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 7e-12 145-202
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 173-182
no_ID  
HMMPanther PTHR15067 FAMILY 8e-53 13-246
HMMPanther PTHR15067:SF7 ZINC 8e-53 13-246
HMMPfam PF13923 zf-C3HC4_2 8.1e-08 155-196
superfamily SSF57850 RING/U-box 1.7e-12 95-202
Wolf-PSORT
Lj4g3v1389210.1	nucl 10, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1389210.1