Miyakogusa Predicted Gene
- Lj4g3v1389200.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LW13_SOYBN |
408 |
68.8 |
73.3 |
(tr|I1LW13) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G63280.1 |
278 |
51.6 |
64.8 |
| Symbols: | C2H2-like zinc finger protein | chr5:25367085-25368848 FORWARD LENGTH=271 |
| Medicago |
Medtr4g104230.1 |
399 |
70.4 |
72.6 |
| zinc finger protein | HC | chr4:43076627-43071285 | 20130731 |
| Soybean |
Glyma13g02180.1 |
408 |
68.8 |
73.3 |
|
| LJGI |
gnl|LJGI|GO026350 |
345 |
100.0 |
100.0 |
weakly similar to UniRef100_Q8VWX5 Cluster: Ribosome-like protein; n=1; Cucumis sativus|Rep: Ribosome-like protein - Cucumis sativus (Cucumber), partial (45%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v1389200.2 |
length: 306 aa. |
| IPR007087 |
Zinc finger, C2H2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| PatternScan |
PS00028 |
ZINC_FINGER_C2H2_1 |
NA |
114-135 |
| ProfileScan |
PS50157 |
ZINC_FINGER_C2H2_2 |
8.517 |
112-135 |
| no_ID |
|
| HMMPanther |
PTHR21385 |
ZINC |
2e-95 |
7-305 |
| HMMPanther |
PTHR21385:SF0 |
SUBFAMILY |
2e-95 |
7-305 |
| Seg |
seg |
seg |
NA |
268-283 |
- Wolf-PSORT
Lj4g3v1389200.2 plas 6, vacu 3, nucl_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v1389200.2 |
|